Publications: 2015

  • Piñeros M, Larson BG, Shaff JE, Schneider DJ, Falcão AX, Yuan L, Clark RT, Craft EJ, Davis TW, Pradier P-L, Assaranurak I, McCouch SR, Sturrock C, Bennett M, Kochian LV (2015) Evolving technologies for growing, imaging, and analyzing 3D root system architecture of crop plants. Journal of Integrative Plant Biology, Dec 18 epub ahead of print, doi: 10.2222/jipb.12456.
  • Kang H, Wang Y, Peng S, Zhang Y, Xiao Y, Wang D, Qu S, Li Z, Yan S, Wang Z, Liu W, Ning Y, Korniliev P, Leung H, Mezey J, McCouch, SR, Wang GL (2015) Mol Plant Pathol. Nov 17 epub ahead of print doi: 10.1111/mpp.12340.
  • Furuta T, Komeda N, Asano K, Uehara K, Gamuyao R, Shim-Angeles RB, Nagai K, Doi K, Wang DR, Yasui H, Yoshimura A, Wu J, McCouch SR, Ashikari M (2015) Convergent Loss of Awn in Two Cultivated Rice Species Oryza sativa and Oryza glaberrima Is Caused by Mutations in Different Loci. G3 2015 Sep 2. pii: g3.115.020834. doi: 10.1534/g3.115.020834.
  • Hua L, Wang DR, Tan L, Fu Y, Liu F, Xiao L, Zhu Z, Fu Q, Sun X, Gu P, Cai H, McCouch SR, Sun C (2015) LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice. Plant Cell (7):1875-88. doi: 10.1105/tpc.15.00260.
  • Yan J, Aboshi T, Teraishi M, Strickler SR, Spindel JE, Tung CW, Takata R, Matsumoto F, Maesaka Y, McCouch SR, Okumoto Y, Mori N, Jander G (2015) The Tyrosine Aminomutase TAM1 Is Required for B-Tyrosine Biosynthesis in Rice. Plant Cell (4):1265-78. doi: 10.1105/tpc.15.00058.
  • Gould B, McCouch SR, Geber M (2015) De novo transcriptome assembly and identification of gene candidates for rapid evolution of soil Al tolerance in Anthoxanthum odoratum at the long-term Park Grass Experiment. PLoS ONE: PONE-D-14-44722R2.
  • Arbalaez JD, Moreno LT, Singh N, Tung C, Maron LG, Ospina Y, Martinez, CP, Grenier C, Lorieux M, McCouch SR (2015) Development and GBS-genotyping of introgression lines (ILs) using two wild species of rice, O. meridionalis and O. rufipogon, in a common recurrent parent, O. sativa cv. Curinga. Mol Breeding 35(81) DOI 10.1007/s11032-015-0276-7.
  • Spindel J, Begum H, Akdemir D, Virk P, Collard B, Redona E, Atlin G, Jannink JL, McCouch SR (2015) Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines. PLOS Genetics 11(2): e1004982. DOI: 10.1371/journal.pgen.1004982.
  • Begum H, Spindel J, Lalusin A, Borromeo T, Gregorio G, Hernandez J, Virk P, Collard B, McCouch SR (2015) Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa) PLoS ONE 10(3):e0119873. Doi: 10.1371/journal.pone.0119873.