Data Sets


High Density Rice Array (HDRA, 700k SNPs)

McCouch S, Wright M, Tung C, Maron LG, McNally K, Fitzgerald M, Singh N, DeClerck G, Agosto-Perez F, Korniliev P, Greenberg A, Naredo ME, Mercado SM, Harrington S, Shi Y, Branchini D, Kuser-Falcao P, Leung H, Ebana K, Yano M, Eizenga G, McClung A, Mezey J. (2015) Open Access Resources for Genome Wide Association Mapping in Rice. Nature Communications (in press)

• Germplasm

• Genotypes

• Phenotypes

• GWAS Results

All GWAS results were generated by using our GWAS pipeline which can be obtained from our Tools and Resources section

•NCBI Assets


Panicle Architecture

Crowell S, Korniliev P, Falcão A, Ismail A, Gregorio G, Mezey J, McCouch S. 2016. Genome-wide association and high-resolution phenotyping link Oryza sativa panicle traits to numerous trait-specific QTL clusters. Nature Communications (in press).

Genomic Selection for IRRI breeding population