Supplementary Table S1. The SNP IDs, chromosome positions, and flanking sequences for the seven rice VeraCode SNP sets for the BeadXpress platform OPA Name SNP ID Chrom. IRGSPv4 Position (bp) MSU6.0_position_corrected Flanking sequence VC0011438-OPA id1002158 1 2725468 2725468 CGCAAGGTACTAGTACTGTGAGGTACTAAAATCCTGTCCGTTGGTGATGCCCGATCGAAT[A/G]GTCACGATTGCATGGTACCTCGAGGTCCTAGCTTGGTCGTGGGGTGGGTAGCTCTAGTTA VC0011438-OPA id1004874 1 6249675 6249695 GCTACTAATATTATAAATTGATAACCTCAATCCTTCGGATAAGTATAAGAACAAATCAGC[A/C]AAGTTTGATGATCTGATGTCCATGGATAGTTGTGTGATTGGGTCTTGGATGTTCTGTGTG VC0011438-OPA id1007050 1 9422897 9422917 AAGTTACATTATACGACAAGCAAGATGGATAAAGGAGCCAACGAGCTTCTCGATCCAATC[A/C]TATTTCCTGCTACGCCACCTAGCCTACATCGACATGCCACCTCTCTCCTACCTTCTTTTT VC0011438-OPA id1008896 1 13485836 13342151 ATCATGGATGGCGAATTCGAGTTCAAATTCGAGGACAACACCGTCCTTAAGTACAACGAA[A/G]TCTTTCCGGACGACGACAAGGTGGTGGCGGCGCCGATGATGATCGACGGCGGTGGAGACG VC0011438-OPA id1009283 1 14203809 14060124 CTTCACGGCTGCATAAGTGTCCCCACCACCCCCATGTGCCATGAAGCTTACAGAATCCTC[A/G]ATGAATGACCGAACTATGCGGCAAATATCTGGCACGGTGCATGAGAATGGAGCAACATAC VC0011438-OPA id1012996 1 24463487 22805597 CATTAATATATTTTTTTGCATAATGATGTAAATTTAGGGTAATGTCGCGTTAGCCTTTCG[A/C]CTAGTTTGACGTGTGCGGTGATGTGGAGGCGTACTGTGCTACAATACAACCTATCACACC VC0011438-OPA id1023978 1 39689189 37932299 GCCAGTACATATAGCACAGCAGGCTTTAGGGAAAAAAAACCTGTAAAAAACACAAAAAAA[A/G]ACGGTGGGCAATAGAGTTTTTTCTAAGTTCTAATGGAGATGACTGATGTTGATTAGTTTG VC0011438-OPA id1027598 1 44152380 42356490 ATCTGCAGTACCTAATTCAAAGAAATCATCAATCCTCTATTTTTCGTACACATTTCCTCC[A/C]TTCTGAACGAGCCCTGATCACTAGGGGTGCTCCTGGCGTGGTGGTTTCCTGCATGAGATG VC0011438-OPA id1027818 1 44375876 42579986 CAGGATTTGATCATGAACTGAACATGCTACAAAATCAATCACAGTTTCTGTCTGAAAATT[A/G]TTCAGTCTTGTGACCTGGATGGCGAGGCAATCTGGATGGAAGGTGGAGGGGCAGGTGTCG VC0011438-OPA id2000835 2 1000481 1000481 GCGGCGATTTTCGCCGGCGCGGAATCCCCACCACCCGTGGCCATCAGCGGCAGCTTTGAG[A/C]GAGCACTGTGCAAACGAATAGCTCGCTGCAGGGAGAGGAGAGGCCGGTAGAAGAGAAGTT VC0011438-OPA id2004058 2 8020370 7991370 TGCTGCTCGCAAACAAGTTATCCTCGAGGTCACGGTTTATGCCGGTGCCACTTGCTTCAA[A/T]CCTACTGTCGTGAAGATCAAGCCACCCCTCACGAGTGAGTTAATTTGCATCCACTACAGG VC0011438-OPA id2004455 2 9007319 8978319 TTGGTGCAAGATTGTTATTCGACAATAAGAATAAATGGTCTAGATTACTGTCTTTCATAC[A/G]GAAGATGTCAACCAAGTGAATTTCTACACATACCGCAGCGCTTATTATTTCTCTGAGTCC VC0011438-OPA id2004857 2 10196520 10167520 CACCACTCTCTCTCCCTCTCTCAGATTTGGCGCACGGGCCATGATGGAGGCTGCGGCACG[A/G]CACTGTAGTGGCTGTGGCAAGGCGGAGGTGGTGGCATCCTCCCCGTCATCGTCCTCTTCA VC0011438-OPA id2007797 2 20839630 19975900 TTAATAGATCGGTGGATGGATGTGATGGTGATGAAATGATCAGGAGGGGTAAGAAGCCTT[A/G]AGGTGAGCTTGCAAGCATGGCGAGTCCTTCCAAACCCTAGCGTTCGCCCTGAGCATCTCC VC0011438-OPA id2007818 2 20887837 20024107 TGGAGAAGACGACGTCTTCTTCGACGCGTTTGACGATGACGACGACGACGACGACGATAA[C/G]AACAGAAGCTCAACGGAGATTAGTACAAGTGAAGCTGGGTACGAGCTGTGGGCAGGTGAG VC0011438-OPA id2009547 2 24457512 23593782 TACAAAATGGACATTTTGCGCACTAATCCTGAGGATAGAATTAATAGGTCACTCAATATC[C/G]CATGCTGGTTTTAAAGTTGGTTTTTGCCACCATTCGACCATGGATACTGGCAACAATTTC VC0011438-OPA id2010498 2 25501876 24638146 CTAGATTAGCAACCTGACTACCACCTGAGGAGCCTCCTCCCTGGCTGCAATACCTGATAC[A/T]GCGGATACGGCACGTCTGGGCTGTCGGGAAAGGTCGGGAAATCCGTCGTCACGCCGCACC VC0011438-OPA id2010605 2 25578182 24714452 CGTGAGATGAACAAGGTCAGGTGTTTCTTCCGTTCCTTTCAGTGAGCTTTCATACAGCTC[A/G]TCAGATGACTTGTCCATGGTGTTATATATGTAGTCATAAAATGGCATGAATAGCGAGTAG VC0011438-OPA id2012558 2 29675365 28782635 AGCTCTTCGACGATGTAACTCAACTGGATCTCAGAGTAAATAAGTCTCGATGAGTTCAAA[A/G]CCAGGCTAGAATAACTTACAGAAAAGCAAATTTGAACAAAACATGCAACATGCTTCAATA VC0011438-OPA id2013007 2 30414334 29521604 TGACTAGGATGACAAAGTAGCCAAGCTTATCCTTGTTTTTTTTGTATGATTCAACCCTTC[A/G]ACGATGTTAATCTTGTTGAAGCAGTAAATCGGCAGCTCTTAAGAAGTGAGTGCACTGGGC VC0011438-OPA id2013413 2 31181896 30289166 AGGACAACCGATTTCAATGTTATCATGTATTCTTGCCTCACTGTCATCCTTCAGAAAATG[A/G]ATTGAAATCCAGAGGCCCGGAACTAAATCGCACGTGTCCAAAACTTCAAATGCAACTCTG VC0011438-OPA id2016584 2 36820856 35928126 AAATCAAATGAAGGTGGTGACTGGTGAGGCTGAGCCAGTACTGATGATAAGGTCTGGTTC[A/G]TAAGCTATATGTTTGACAAATATTGGTACCTTCGCTGCTTCTCCTATTTCTCATGTCTCT VC0011438-OPA id3006808 3 13276088 13222807 GTTGGCGGAAAAAGATATTTCGAAGTTAGCTGATCTGATTGGAGATGAAGATAAGGCAAA[A/G]GAAGTTGTCGAAGCAGCAAAGGCTTCAATGGGTAATGAGATATGATTACATTTAACTTCC VC0011438-OPA id3008390 3 17591449 16954362 AGAATGTGTGCATGCTAAAGGATGCGATTATGCATTGTTTTTAATCGATGCATTTATTAC[A/G]GGAGAATGTGTACATATTGTGCATGGCGTTAAAATTATCCTTGGTCTTGATGTATAAACA VC0011438-OPA id3008459 3 17728657 17091510 AAAAAAATCGCAACATCAACAAATGCGAGGAAAATCGGTCGCTTTGCTGCGCATACATAA[A/C]TGTGCCGAGACCCAAAAATATTATTAACACAGAATCCCAGTCTTAACTACTCCGGTAGCA VC0011438-OPA id3008850 3 18689081 18051901 ATGTAAGTCCGGTAGGCGTCGGCTGGCGGCGGCGGCGTGCCATTCGGAGTACGGACGACG[A/C]TGCCTGCTTCACCTGCATGGATATAGCAGAGTGCAGGTGCAGGAGAGAGCAAGGAGGCTA VC0011438-OPA id3009973 3 22031284 21269642 AAATGATGTGGCTACCCCAGACCCAGAGCATGAGGAAGAGATCTTTGAGAGCCTACGGCC[A/G]CACAAGAACATCGAAGAATTGGAGGTAGTCAATTATAGTGGATACAAATATCCTAGCTGG VC0011438-OPA id3010459 3 23401841 22640146 ATGTCCCTGAGAAATCTGAACTGAAGAAAAGAAAAGAAAAAAAAAAGATCAGGCGACGGC[A/G]GGCATGTCCCTGAGCCAGTGGTCGAGCGGCTTGCCGATGGAGTAGACGACGAAGCCGATG VC0011438-OPA id3012359 3 28534280 27766904 TAGGTTGTGCTTTTTTTGGACAAAGGGAGTACTTTGTATTGTAAATATTTTAACAAATCT[A/G]AACAAAATTGTTTGCTATTCCCTCTGGTATCTAAAGAAGTCGAGGAAATCCTTAAATACA VC0011438-OPA id3015719 3 33525612 32667787 CCTAGTGTTAGCTTCCAAATATAGAATACACCTTTCATGTTCTTCTTGCAACCTTGTCTG[A/C]ATAATTCATGTGAAATACCACCAATTGCATAAGTATACCTGAATTTTGTGTGAACAAAAT VC0011438-OPA id3016444 3 34544442 33686617 AACGACATTCAAGGCGCCCAGGTGCTAGCGGTAGGGAGGGACTACATCATAGGTGAAACG[A/G]GCGGGCAGGACTCAGGAGGGATTTTCAGTGTCTTATGTAAGATTGGAAAGGCAGACATAG VC0011438-OPA id4000463 4 727526 735950 GCAAGAGGAAACCACTCGTTCCCTTGCCACCTCCCGATCCGATGGAACTCGGATTCCTAC[A/G]AAAAACTGTCCGGGAGTTAACATCCATAATGAGGATGAATGGCTAAGGGAGGCAGAGCTT VC0011438-OPA id4001882 4 4449726 4453582 ATATTCCAACCTGCAACGAAAAAAAAAAGTTATAGATTTCAGTAACAGTTAATTGAGTGC[A/C]ATTGTGCATCGCCATTCAATTCCACATTAACCAACATTCTTGCAGAGCTAAGAAAAATCT VC0011438-OPA id4002852 4 7420537 7423419 ACTTTGAACATCACATGTTCATTGCACATGCATTAGATGATAGAGAAGTGCAGTGCCATT[C/G]AGACAACAAAATATAATACTGGAACCAGGACACAACCATAACTTAATCGCCAGACAAGAT VC0011438-OPA id4003888 4 13273436 13216691 TCCGGCGGAAGCAACTCTCTGGCGGTTGGCACACACGGCGCTGCCGGTGCTAACCATTTA[C/G]GTCTTGCTTTAAATCGTTTCCTTATATTGGCGCGAGAATAGGCTTAAGTTTGTTGGTCCT VC0011438-OPA id4006172 4 20418783 20224518 GAGTTTGGCTTGATTTGGACACTACAATGTTCAGAAGCATGAAGATGGACCTGCCACTCT[A/G]CCGGAAGAGCAAGGAAAGAAGAGAGGATAGTAGAACATTGGCCCTGTTTGGAAGATTAGC VC0011438-OPA id4007444 4 22833825 22250179 TTCTCTGTATTTCGTGTGATAAAAGAGCAAATGAAAAAAAAGGCAGGTAAAACAGGTTAG[A/G]GTCAGCCAGTCAGGCATCCATTGAAGGGGATATGAATATGATGAGGTTCCATTTCCGAGC VC0011438-OPA id4007764 4 23901845 23318160 AAAGCGATTGAGCGACGCGTCCCCTAGCAGGGGCGTGCGTTCCATCCCAGGGGACGACGC[A/G]GACGGAAAGCCTAACAGACAACGCTAGGGGGACGGGCCGAAGCACCGCATTGGTGATGCC VC0011438-OPA id4009094 4 28198904 27615261 AAGATGTACCGTGCCAGCACTGGAGTAATGTGAACCATAATGGAACTTTGGGATGATTGG[A/G]TCCTCAAACGTAGAGTAGCGCTCTTGGAATTTTTCTAGTCGCTCAGGGTTTAGTGCACCA VC0011438-OPA id4010924 4 32303312 31719666 TTGTTTGGGGGAGAGTGCAAAAGAACAAAAACGGTTTTGATCAACGAGTCAACTTTATGC[A/G]GTTCGTCCAGGGGAAATGGACGGGCAAGAGAAATCAATTTGACTTCTACGCAAGCTTACA VC0011438-OPA id5000333 5 571200 593158 AGTTTTTGGGACGCGCGCTCTCTGGAGGAGTGGAGGGAAACGGACGGAGAGAGAAATTTT[C/G]GTTGCGAAATGACGGTAGTGCCCTTGGTGGGTGGAATAGAATTGGGCTGAATTGGCCTTT VC0011438-OPA id5001534 5 2714998 2736928 AGGTTGGTACTGTTCAGAAGGAGATTCATACTGCTCTGATAATTATACTTGTGGCAAAAT[A/G]TATGGATTGTTTCATGAGGCTCTTCACTCTGGATACTTGTACATTGAAACGTTGTTGTCA VC0011438-OPA id5003785 5 7422512 7411394 AATGACAAGTAAATTGAAATGGAGTACAAGTTTTTAATAACTCTTGAAGATGAAGATGTT[A/G]TTGACAATCAAAATTTTAAAAAATGGACCAAATCTCGTCCTAACGGGAGAGAGTGTTACT VC0011438-OPA id5005055 5 11631818 11620687 GGGAGGGGCAGATCCACTGATGAGAACCTCGACAACAGCGGATCAGGTGGCGGGGACCTC[C/G]GCAATAGTGGATCCAGCATGAGGGAGAAGATGATGGCAGAGCTGGCGCTAGGACGGCCAT VC0011438-OPA id5006236 5 15533829 15498558 GGGCCAAAAGGCATAATTGAGGCCACCCGTTGCAGTGAAAGGTTTGGTGGCCAGCGAAGG[A/G]CCGGACCACATACATGACCTCGCGTCCGTCTCACCATAAATCCGCCATCCCTCTCCTCTC VC0011438-OPA id5014934 5 29579363 29435138 AATAATTTTGGTACAAGTTCACATCACATGTTGCTTACCTATTATCAATTCTCAAGATAA[C/G]AGCTTACCATGGTTCCTGTGGAGTTTATATACAAGTAAATTGGCTTGGTGCGGTCATCAT VC0011438-OPA id6001137 6 1531150 1531150 TAGATTCTCCGAAAACGGATGCTGTAACAAATATGCAGTGTGGTATGGCCCAAAATTGTG[A/G]CACTTAAGCGAGAAAAGTAAAGTACTTGGCAAAAGAAAGGAACCTATATTACGCAAACAA VC0011438-OPA id6003050 6 4021326 4021326 AAGCTGCTAATTGGGAGATGGCGTCTGAAGATATCCAGGCATTTGAGACGCTCACTGGAA[C/G]TCCTACGGAAGGCATCGCTACTCCACTGAATTCTTTGTTTCCTACGTTATAGCTCATGCC VC0011438-OPA id6004481 6 7002214 7002214 TTTTTTGAAATGGAACCAACCCATATAGTTCTATTTTCAACTAAATTTTGTGTAGTTATC[A/G]CCGCTCAATTTGTACAGAAAATTATACTAGCCATGTAACATATAAATGTATCAACATAAA VC0011438-OPA id6007316 6 11762663 11693663 TAGCGACCGGTTCATGGAGGCTGGCAAGTACATAGTGGAAATGCTTGACCGCGGAATGCG[A/G]CCAAATGCAGCGACATACCTGGCTGTGTTTGAGGCATACGTGAGGATGGAGAAGGTGGAA VC0011438-OPA id6009055 6 16415144 15537144 TCGACTTGCCGACAAATTTCGTTGAAAATCTAGAGAAACTTGCGAGAAGAGTCAAACCTC[A/G]CGTCGTTCCTCCACAAATCAGGTTCTCGGCACCTGAACCAGTCATTTTCGCACCATCAAA VC0011438-OPA id6013529 6 26025122 25147122 CACTTTTCACCTCATTTTGGTAGACCCAAAAGTTAATGCATAAACATAAAAAAAGCAACA[A/G]TTTCTCAAACTAAAACAATTTGTAGGCGTGAAGTAATCAAATCTACATGATTTTGAAGTC VC0011438-OPA id6014475 6 27191592 26313592 TTTTTTTTCCATTTCTTGGCTCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTT[C/G]TTGTTGATTGATTGATCCAATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTC VC0011438-OPA id6015793 6 28504617 27626617 TCATCAGTAACACGAGCTAATTAAAAGCATCTTCCAGCACGGCAGGAGGAGCACACATCC[A/C]TCATCCTCTGACACCGACATGTGGCCCCACACCACAGGCACTTGACCTGTGTCGGATCCG VC0011438-OPA id6016490 6 30085266 29207266 AAGCAACGAAGGAGATGGCAAAAAACACATCCCCCGACAAGTTACAATGTTCAGCTACAG[A/C]AGCATCCACAGATGACACTTATGACAGATGCATCATCTGCTTGGCACAAGACAACCATAA VC0011438-OPA id7000337 7 1899740 1866589 ATCTCCCAACCAAACAAAGCACAGTGTGACTCGCATGACTCCCATCGCCATCGCTTGATC[A/G]GCTACTTGCTAGTACTTCACCCACGTATACGTACTCCTCGTATGAATTGTTCTTCTTCGT VC0011438-OPA id7003112 7 20578707 19917556 TGTTTATGCTGGATGAGAAAGTAGATTTGGGGTCTAACTCATGCTGCCATTTCTGCATAC[A/C]AGAGCAACTAACCATAACCTGACAGCAACAACCTGCAGGCAGAAATTCAGAAAGTTGTGT VC0011438-OPA id7003442 7 21940250 21279099 TCGAGGGCCATTAAATCTTTTCTAAAACTTTGATGAGGAAACGCCTTGAACAATGTCGTC[A/G]GTGCATTTGCATTGCATACTTGCTGTTAATGTTGAGACCTTGTTTGATTAACCCCTCCCA VC0011438-OPA id7004429 7 24973974 24312823 TTATGTTTGGTTGCAGTAAATACCTTTCATTTGCACTGGCATCACCGGAAGCTCCATCAG[A/C]AGTCCTCACCTCATCATCATGCTCATCCTGGTTATCACTTGATCCAGACAATTGGTCATC VC0011438-OPA id7004719 7 25979966 25318815 CAAACCGCTAAAACCCCAGTGGCACGTCACTAAAACCTCAACTTCAGCTCTGGCATTACA[A/C]GCTCACGGTCATCCCTTAGTCCACAAGTAAAACTGCCACTAAACAAAGCAAGAGGAATTA VC0011438-OPA id7005655 7 28857459 28196308 GCATCATCTTGAGGGAAGGCTCACCAACCATATGGTGGCGTTTGACATGGTTGCCGAGAC[A/G]TTCAAGGAAATGATGCCGCCTCTAGTGACCACGAAGTTCTTTGCAAACCTGCTAGCCATG VC0011438-OPA id8002554 8 8235552 8235552 TGCTTGGTCACACTTGCTCTCCTAGACAATTCATATATTAGCGAGACATTGGTTTTCTAT[A/G]ATAAGGCCTTCAGAGAGCTCAAGACCCTGGAGATTATTAGGCTAACCAAGTTGAAAACAG VC0011438-OPA id8002972 8 9202561 9202561 CCTTCTTCTGGACATCGCCAAAGGAATAAGGAATTTCCTTTTTGTCCATGCATGGTCAAC[A/C]GTTGGTAATTGTTACAAATGGAACAAGAAGAGGAAATTCCTGCAATGTTGGTTATGACCA VC0011438-OPA id8005361 8 19921605 19830886 CACAACCTTCTGTGTTGAAACCAAAATAGTGACAAACCAATTCGTTTAAGCCCTTACGTC[A/G]AAATAGCAAGCACCACCGTTTGAATTCCTGTGAAATAGAAAAACATATTATGTCAGCTCT VC0011438-OPA id8005525 8 20479641 20388922 TGCAGAAGCTGACTTATGTTGAAGCAAACCAAGGAAATGGGACCATCGAGGAGCTAGGTA[A/G]CCTGACACAGCTCAGAAGATTGGGCATTGTCAAGCTGCGTGAAAGGGATTGCATGCACCT VC0011438-OPA id8006950 8 25431873 25341154 GTTCACTGGTAGCAAAGCAGATTAAGCACGCTTTTGGCATCTCTGCAAGAAATTGTTTAA[A/C]AAATACTAAAACACAAGTAGGCATTAACAGCTTCTGTTTCTTCTATTATTAGGACTTAGA VC0011438-OPA id9000894 9 4283413 3716701 GCTAGGCCCTCCCGGCCTGTGGACTCCCTGGACTCTCCTCTGTCCATTTCTCGGAGTTTC[A/G]GGTTGATTTTCTGGTATTTTGATGAAGTTCACAACCCATCCTTGTATGGATACGTAATTC VC0011438-OPA id9002640 9 9791879 9225167 ATGGGGAATAGAACAGAAAACTATTAAATTTCTGTTGTCAACTTTTAGGCTAAAACCTAA[A/C]ATGCCCTTGTTTATACCGGCAGTACATTACCACCATGTAATTTGTACCACAAAAGTCCTC VC0011438-OPA id9004100 9 15380799 14726087 AAAAAATTAGAAGAGAAAAGGGTGAAATCGAAACTCACCCCAGTGAAGCAACTCTCAACT[A/G]GCCAATGGTTCTAGAAACTGGGATAATCAATGATAAGTAAACAGCTTTAACAATTTATGG VC0011438-OPA id9004741 9 16419066 15764354 AGGGAGTACTACATAACAACATACTGTTCTAATGGAATAGGCAATGTCATAATGACGTTT[A/G]CATAAAACTTACAGGGTATCATGTCTTATACCGAAGATACCATGATGACATCAGCATGGT VC0011438-OPA id9005403 9 17656680 17001968 GAAAGCCTTTCGGGCCGGACAGATTACAGCAACAGCAGCAACTAAGCAACAGTACAGCTT[A/G]AAGGAAGCGGCTATTTCGACAAGCATATGAAATAATTCCAGTAAAATGAGAACCACAAGA VC0011438-OPA id9007259 9 21959597 21127474 GCCGGGGTAGGCACCATCATTTTTCTGAAGAACGAAACCGGCCTTTCGGTGTCTGAACAG[C/G]CCGGATGAAAGGATCATCAACGATGATGCAGGCTCCAGCAGTCATAAATCATAGGAGTAC VC0011438-OPA id10002499 10 9102616 8834118 CCGAAAACAGTTTTCCTCGGACCCGCCGGCGTCTGCACGTCTTTGGTCAAGGCGCATGCA[A/G]TAAACAGAGTGGCGAAAAGCTCGGCGGTAGGGGAGAACCCACAGGTCCGGCACATCCAAG VC0011438-OPA id10004689 10 17349256 16820816 ACTACGACGATCAATCGGGAAAGAAGGGGGAATCATTCGAGATACACACTGCAATATGTG[A/T]GGTTCATAAGCTAAAAAAAAAACTTAGGATGCGTTTGAATCAGATCATGAGCTGAGCTTT VC0011438-OPA id10005255 10 18436475 17908036 GACAACAGCGTGATGCTATTGGGGGAGTTCAATAGAGGCAGTGAGATCTAGAAGCTCAAC[A/G]AAGCCGAAGAAGCGACTCCAACGGGCTAATTGCATCAAGAGCCAGGCATGGACATGGTGC VC0011438-OPA id10006963 10 22497017 21970215 ATTGACTAGCACCTATGATTCCTCAAAAGGGCATATAAAAGACTAGGTTAAAAATTGGCA[A/G]CATGACATACACAGAAATAAATATGATAGTCGTTTTGAGGATTTTGCTAAATGCTTGTAA VC0011438-OPA id11000118 11 618389 618389 AAAATGAGCTATTTTGAAGTATTTCTATAGTTGCAGTATGCTTGATAACAAATCTTACTT[A/G]AACAGCGACATGTAGTTGGCTAGTTGGCAGTGCTTCTTACATTGTGTTAAACCATGGTAT VC0011438-OPA id11000858 11 2726164 2738856 AAGTAAAGTGAGGACGCGTTGATTCTGGAAGGCCATGTGGCACATGTTACACGCGTACGT[A/G]CGAACCATAGCCTTGCACACGCCGCTCCATTAAAATTTTGGTTTCTTCTTCTCCTTCAAT VC0011438-OPA id11001559 11 3942492 3955184 GTGTAGCTCCTTATGCAATAGTTCAGCGCCGACACACATACACTTCTACTTCCATGACAA[A/G]ATTACCGGCCCCTCGCCATCCGCTGTGCAGGTGGTCAGCCCACCGAACAAAACATCACCA VC0011438-OPA id11005021 11 17216890 14926747 TTTCGGGTACCCGAATTTCTCCCAAATTAATATGGTCGTTTTCACCCCTAGCCATAAGGG[A/C]ACGTATGATCACGTCAGAGTCAATTCAACCAGAAACTCGAGTCATCCATCCTCTTGAGCC VC0011438-OPA id11007625 11 21973835 19639066 TGACTGACATATATTTAAATATGACCAATCCATTTTCTACGTGTGAATTGAAGTGATGGC[A/G]ACACAAATTTTTTTAATAGTTGTGCTGGATGAAAAATTTCACTGAGGCCCTTGACAGTTT VC0011438-OPA id11007840 11 22619825 20311190 TTAAAAATGTCAAGTCTGACAGGCTCATTGGGATTTCACCGGAAATACGGTTCATTGACA[A/G]GTCAAGTGATTGCAATGATTTCATTGCTCCGATATCATCTGGAATTTTCTGTTGAGATTA VC0011438-OPA id11010097 11 27458466 25149678 GGACATAGCTGCAGGCACAAGTGCACAACATCCCTTATTAAAAGTCAATGATGCGCAGAA[A/C]CGCAAGATGGCAACACTGCGAAACTGTATCACAGTTATAGGCATGAAACCATGTTCCACA VC0011438-OPA id11010335 11 28143109 25828816 TTGATTTCTTTTTTCCAGGTTATTTTTTTGCGTTGTTTATTGAGATTTGTTGGTTCCCTG[A/G]GCGCAACATTTCTGTCGTTTCTTGGCCTGAAAATCTTCGAAATGTTTGATGCCTTCCTGT VC0011438-OPA id11011035 11 29536489 27222168 AATACCATCTAAGTTCACTAAAGATACATGGCAAGTTACTCCGGTTGCCTCCATTTTTTA[C/G]TTCTTTGTCAGGTCTCATTGATCTGTGTATTACACCAGCTACTCTGACACAAGATCATCT VC0011438-OPA id11011159 11 29665527 27351205 ATAATTTGCATATGTGTTTCAGATGATCGTCAGCAAAATCATTACATTCTTGTAAATCCA[A/G]TACTCGTATTAGCTTGCACTTCCGAACATAAGAGACTGTATCACTTGTATCCCCGAATAC VC0011438-OPA id11011505 11 30575776 28243993 GCTCGCATCCTACCGTCCGCTCTGCCTTGAGATTCGTGCGGTAGTTTCTGGGAAGCTACG[A/T]GCACATGGATTCTTGCACACGGAAATATTATCTTGTGGATAGCTAGTATGCAATGCCGTG VC0011438-OPA id12000266 12 725535 725535 CCCCCCGGCTCGCAACAAGAGAGCAGCGTTCTTCGAAATGCATTACAGGTAGATTTGTAA[A/G]ATTTGTGCACCGTACACATAATTGGAACTAACTCCTTCCTTCTGTTGGTACTAGACTCTA VC0011438-OPA id12000592 12 1304968 1304969 AATACAAATATAAAACATTTGCTTAAACAGAAACAAAAGCTCTCATAGTGACTGGGTATT[A/G]CTAGTACGAGATACCTGGTTCTCAATCCGTGTGTTAAGAGCATCGATATTTGTTATGCTC VC0011438-OPA id12001422 12 3516932 3516878 TTCAAGTCAGCCGCTTAGATGAGGCTCTGAAGGAATGTGTCAGGCAGCTGCACCTAGCAC[A/G]GGAAGATCAAGCGGAGAAAGTCCATGATGTAGTTACCAAGTCCCAGGAGTTGGAGTCTGA VC0011438-OPA id12001513 12 3650678 3650625 TAGAATATGTGTTGTTGCACCCAGATTAAAGCACTGCAAGAAACAGGGCACATTTGTTCA[A/T]TGGTAGCTCTAAGTTCCTCAATAATTTGAGGCCAGAAAACTTTTAGTAAAGTGATATATA VC0011438-OPA id12004456 12 12285388 12134661 GAGAACCTTCATCGGATGAAGATGATTAGGAAGATGTAAAGCCTACTCAAGTTGTCAAGC[A/G]TCTCTACACTGGAGTTATTATTTCTCTCATAGAAGGATGATTCCCGTGAAGATGAGTCAC VC0011438-OPA id12005540 12 15922269 15771498 AACTATCACATAATCTATACTTTTAATTTATCTATACTTTTTTATAGGTGTTTCAATGAC[A/G]TGAGCCTAATTTGAATATAACTCGAAATAGCATATATTTTTACAACTTAAAGCACTGTTA VC0011438-OPA id12007081 12 21819992 21582854 ATGGTTGTAGGTTTCAGATTGCTGTGGCCACTATTTTGCTTTGTAGTTTATGATTTTTAA[A/C]GAAATGGACTGCAGATGTCACAACACAACCAAAAGATGCCCCTGGTGTACTTAAGGAGCG VC0011438-OPA id12008285 12 23933567 23696312 GAGGATGGCTTTATAGAGGAGGAGGCGGTGGGTGGTGCGCGGAGCTGGAAGACGAAGACA[A/C]GTGGCGCTCGGTGATTGGATTAGCCTGGTGGCACGGTTTTATGGGCCAACTTGTAGCACG VC0011438-OPA id12009153 12 25558936 25298886 GCTAGGGGAGATGAACTCTGGATGCTTGATCTTTGATGAATCTTGATGTACTGATACGTA[A/G]GATCGTTGATTTGGTATGGTTTAACTTGTGGCATGGAGGGAAGCTGACTTGTCAACGGGA